PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009798818.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 210aa    MW: 23961.8 Da    PI: 8.2062
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009798818.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.85.5e-18103153255
             AP2   2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+++AeIr p     k +r +lg++ t+e+Aa a+++a+ k++g
  XP_009798818.1 103 RYRGVRRRP-WGKFAAEIRNP---DrKGARLWLGTYETPEDAALAYDQAAYKIRG 153
                     7********.**********8...3245*************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541719.15E-23103162IPR016177DNA-binding domain
SMARTSM003801.8E-35103167IPR001471AP2/ERF domain
PROSITE profilePS5103224.302103161IPR001471AP2/ERF domain
CDDcd000183.41E-30103163No hitNo description
Gene3DG3DSA:3.30.730.101.2E-31103162IPR001471AP2/ERF domain
PfamPF008471.0E-13103153IPR001471AP2/ERF domain
PRINTSPR003672.6E-13104115IPR001471AP2/ERF domain
PRINTSPR003672.6E-13143163IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    Send to blast
MYEQTTISDS DLSVLENIKF HLLNDNDFSQ IYSTFDQCFS NAEIINSPDS SFGSSPTEEI  60
SWGDMLTSVN TTWQRVDNLE YKEETKKNHV VARGVHAPQD WNRYRGVRRR PWGKFAAEIR  120
NPDRKGARLW LGTYETPEDA ALAYDQAAYK IRGSKARLNF PHLIGSNISE PVRVAPRRRC  180
LSPEISSSSF SLSFVENVPL KKRKLEGNIG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A2e-27104161360ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAB8281530.0AB828153.1 Nicotiana tabacum ERF91 mRNA for ethylene response factor 91, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009798818.11e-157PREDICTED: ethylene-responsive transcription factor 2-like isoform X2
RefseqXP_009798817.11e-157PREDICTED: ethylene-responsive transcription factor 2-like isoform X1
SwissprotQ8L9K14e-45ERF99_ARATH; Ethylene-responsive transcription factor 13
TrEMBLK4AYX11e-103K4AYX1_SOLLC; Uncharacterized protein
STRINGSolyc01g090300.2.11e-102(Solanum lycopersicum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.11e-45ethylene-responsive element binding factor 13